Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917194.1_cds_XP_016466839.1_59653
CDS Infomation

[gene=LOC107789521] [db_xref=GeneID:107789521] [protein=SRSF protein kinase 1-like] [protein_id=XP_016466839.1] [location=join(38563..38748,40053..40841,41086..41133,41225..41545)] [gbkey=CDS]
Sequence

ATGTCTTGCTCATCATCGTCGTCGGCGTCGGAGGATGAAGTTGAGGGATTCGATTCTTAC
CGGAAAGGAGGATACCATGCGGTGAGAATCGGCGATTCATTCTCTGGTGGCCGATATATC
GCTCAGCGAAAACTCGGCTGGGGAGAGTTCTCCACTGTTTGGCTCGCTTATGATACTCGA
TCATCCGAATATGTTGCTTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCAGCT
CTTCATGAAATTGAAGTCCTTTCTGCGATTGCCAATGGTGATTCATCTAATAGTAAATAT
GTTGTACGACTTATTGACCATTTTAAGCATACGGGCCCTAATGGACAGCACCTATGCATG
GTTCTTGAATTCCTTGGTGATAGCTTATTGAGGCTGGTCAAATATAATCGCTATAAGGGC
CTCGAGATGAACAAAGTTAGGGAAATATGCAAATGTGTTTTGACTGGTTTAGATTATTTG
CATAGGGGACTTGGAATTATTCATACAGACTTGAAACTTGAAAATATTCTTTTACTTTCT
ACAATTAATGCCACAAAAGATCCCATTAGATCCGGAATGACTCCCATACTTGAAAGGCCT
GAGGGGAACCCTAATGGAGGAGTAACAATGAATATCATCGAGAAAAAACTAAAGCAAAGG
GCAAGGAGAGCAGCAGCTAGGATATCTGGAAGACGGGCTTCAATGGGTGGGGTAGGAGGG
ACTCCAAAATCAAATAGATCTCTTGATGGGATTGACTTGAGGTGCAAGGTTGTGGATTTT
GGAAATGCATGCTGGGCTGATAAGCAATTTGCACAAGAAATTCAAACAAGGCAGTACAGA
TCCCCTGAAGTTATACTTCAATCTGGATATTCATTCTCTGCTGACATGTGGTCTTTTGCT
TGTATTGCATTTGAGCTTGCTACCGGTGAGATGATGTTCACTCCCAAAGGTGGACAAGGT
TTCAATGAAGATGAGGATCATCTAGCTATGATGATGGAGCTTCTAGGGAAGATCCCTCGG
AAGATAGCCATTGGTGGGGCTAGATCCAAAGATTACTTTGACAGGCACGGAGATTTGAAG
AGGATCCGTAGGCTGAAATATGGTTCTCTCGATAAATTGCTAGTTGACAAGTTTAGGTTT
TCTGAAATTGATGCCCATGAGTTCACAGGATTTCTTGGTCCTCTTCTTGATTTTGAGCCA
GAGAAACGACCAACTGCTGAGCAGTGCTTGCAACACCCATGGCTCAACGTCAAAAATCTT
AAGAAAACAGAGATGAAGAGTGAATCGGGTGTGGAAAAGGTTAATGTCGGAATGAGCAAG
CTACAAATTAAGGTGGGTAGGTGA

Peptide Sequence

PEP ID

XP_016466839.1
PEP Infomation

PREDICTED: SRSF protein kinase 1-like [Nicotiana tabacum]
Sequence

MSCSSSSSASEDEVEGFDSYRKGGYHAVRIGDSFSGGRYIAQRKLGWGEFSTVWLAYDTR
SSEYVALKIQKSAPQFAQAALHEIEVLSAIANGDSSNSKYVVRLIDHFKHTGPNGQHLCM
VLEFLGDSLLRLVKYNRYKGLEMNKVREICKCVLTGLDYLHRGLGIIHTDLKLENILLLS
TINATKDPIRSGMTPILERPEGNPNGGVTMNIIEKKLKQRARRAAARISGRRASMGGVGG
TPKSNRSLDGIDLRCKVVDFGNACWADKQFAQEIQTRQYRSPEVILQSGYSFSADMWSFA
CIAFELATGEMMFTPKGGQGFNEDEDHLAMMMELLGKIPRKIAIGGARSKDYFDRHGDLK
RIRRLKYGSLDKLLVDKFRFSEIDAHEFTGFLGPLLDFEPEKRPTAEQCLQHPWLNVKNL
KKTEMKSESGVEKVNVGMSKLQIKVGR

Transcript Sequence

Gene sequence data has not been registered.